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The Detection of OLR1 RNA in Human Coronary Plaque Tissue


Authors : Srinidhi Nagunuri; Dr. Sarah Daly

Volume/Issue : Volume 11 - 2026, Issue 9 - September


Google Scholar : https://tinyurl.com/3fudhfu3

DOI : https://doi.org/10.38124/ijisrt/26sep016

Note : A published paper may take 4-5 working days from the publication date to appear in PlumX Metrics, Semantic Scholar, and ResearchGate.


Abstract : This investigation looked at whether the OLR1 gene plays a role in coronary artery disease. This was done by examining whether OLR1 RNA would be detectable in human coronary plaque tissue using NCBI Blast against RNA sequencing data. Coronary artery disease develops when cholesterol, lipids, and inflammatory cells build up in the coronary arteries, and OLRI is a key gene involved with the disease since it plays a role in oxidized LDL uptake and foam-cell formation. The human OLR1 mRNA sequence was confirmed through BLAST and then compared to data from experiment SRX20907944, an RNA‑seq dataset from human coronary‑plaque tissue of people affected by the disease. The BLAST search produced 150‑base alignments with 98.64%–100% identity and extremely small E‑values (as low as 1 × 10⁻⁶⁹), demonstrating that OLR1 transcripts were present in the plaque sample. A separate BLAST analysis also detected OLR1 RNA in diseased aortic‑valve tissue affected by calcific aortic valve disease, with 100% identity matches and E‑values down to 2 × 10⁻⁶⁹. These findings support the hypothesis that OLR1 is found in atherosclerotic tissue and show that the gene plays a role in not only coronary artery disease, but also calcific aortic valve disease.

References :

  1. Gaggini, M., Gorini, F., & Vassalle, C. (2022). Lipids in Atherosclerosis: Pathophysiology and the Role of Calculated Lipid Indices in Assessing Cardiovascular Risk in Patients with Hyperlipidemia. International Journal of Molecular Sciences, 24(1), 75. https://doi.org/10.3390/ijms24010075
  2. GSM7515111: CAVD_4; Homo sapiens; RNA-Seq - SRA - NCBI. (2023). Nih.Gov. https://www.ncbi.nlm.nih.gov/sra/?term=SRX20795471
  3. GSM7565988: HT147_ACS; Homo sapiens; RNA-Seq - SRA - NCBI. (2023). Nih.Gov. https://www.ncbi.nlm.nih.gov/sra/SRX20907944
  4. Gui, Y., Zheng, H., & Cao, R. Y. (2022). Foam Cells in Atherosclerosis: Novel Insights Into Its Origins, Consequences, and Molecular Mechanisms. Frontiers in Cardiovascular Medicine, 9, 845942. https://doi.org/10.3389/fcvm.2022.845942
  5. Kegg Brite: Br08601_hsa05417_2822542. (n.d.). https://www.kegg.jp/kegg-bin/list_menu?id=hsa05417
  6. Lerman, D. A., Prasad, S., & Alotti, N. (2015). Calcific Aortic Valve Disease: Molecular Mechanisms And Therapeutic Approaches. European Cardiology Review, 10(2), 108. https://doi.org/10.15420/ecr.2015.10.2.108
  7. Miyoshi, T., Yuan, Z., & Shi, W. (2008). Association of a Vcam1 mutation with atherosclerosis susceptibility in diet-induced models of atherosclerosis. Atherosclerosis, 196(1), 234–239. https://doi.org/10.1016/j.atherosclerosis.2007.05.004
  8. NCBI. (n.d.). BLAST: Basic Local Alignment Search Tool. In Nih.gov. Retrieved July 28, 2026, from https://blast.ncbi.nlm.nih.gov/Blast.cgi
  9. OLR1 oxidized low density lipoprotein receptor 1 [Homo sapiens (human)] - Gene - NCBI. (2024). In Nih.gov. https://www.ncbi.nlm.nih.gov/gene/4973
  10. Poznyak, A., Grechko, A. V., Poggio, P., Myasoedova, V. A., Alfieri, V., & Orekhov, A. N. (2020). The Diabetes Mellitus–Atherosclerosis Connection: the Role of Lipid and Glucose Metabolism and Chronic Inflammation. International Journal of Molecular Sciences, 21(5). National Library of Medicine. https://doi.org/10.3390/ijms21051835
  11. Reiner, A. P., Carlson, C. S., Thyagarajan, B., Rieder, M. J., Polak, J. F., Siscovick, D. S., Nickerson, D. A., Jacobs, D. R., Jr, & Gross, M. D. (2008). Soluble P-selectin, SELP polymorphisms, and atherosclerotic risk in European-American and African-African young adults: the Coronary Artery Risk Development in Young Adults (CARDIA) Study. Arteriosclerosis, thrombosis, and vascular biology, 28(8), 1549–1555. https://doi.org/10.1161/ATVBAHA.108.169532
  12. Reiner, A. P., Carlson, C. S., Thyagarajan, B., Rieder, M. J., Polak, J. F., Siscovick, D. S., Nickerson, D. A., Jacobs, D. R., Jr, & Gross, M. D. (2008). Soluble P-selectin, SELP polymorphisms, and atherosclerotic risk in European-American and African-African young adults: the Coronary Artery Risk Development in Young Adults (CARDIA) Study. Arteriosclerosis, thrombosis, and vascular biology, 28(8), 1549–1555. https://doi.org/10.1161/ATVBAHA.108.169532
  13. Widlansky, M. E., Liu, Y., Tumusiime, S., Hofeld, B., Khan, N., Aljadah, M., Wang, J., Anger, A., Qiu, Q., Therani, B., Liu, P., & Liang, M. (2023). Coronary Plaque Sampling Reveals Molecular Insights Into Coronary Artery Disease. Circulation Research, 133(6), 532–534. https://doi.org/10.1161/circresaha.123.323022
  14. Zhang, Y., Ling, Z. Y., Deng, S. B., Du, H. A., Yin, Y. H., Yuan, J., She, Q., & Chen, Y. Q. (2014). Associations between CD36 gene polymorphisms and susceptibility to coronary artery heart disease. Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologicas, 47(10), 895–903. https://doi.org/10.1590/1414-431x20143825

This investigation looked at whether the OLR1 gene plays a role in coronary artery disease. This was done by examining whether OLR1 RNA would be detectable in human coronary plaque tissue using NCBI Blast against RNA sequencing data. Coronary artery disease develops when cholesterol, lipids, and inflammatory cells build up in the coronary arteries, and OLRI is a key gene involved with the disease since it plays a role in oxidized LDL uptake and foam-cell formation. The human OLR1 mRNA sequence was confirmed through BLAST and then compared to data from experiment SRX20907944, an RNA‑seq dataset from human coronary‑plaque tissue of people affected by the disease. The BLAST search produced 150‑base alignments with 98.64%–100% identity and extremely small E‑values (as low as 1 × 10⁻⁶⁹), demonstrating that OLR1 transcripts were present in the plaque sample. A separate BLAST analysis also detected OLR1 RNA in diseased aortic‑valve tissue affected by calcific aortic valve disease, with 100% identity matches and E‑values down to 2 × 10⁻⁶⁹. These findings support the hypothesis that OLR1 is found in atherosclerotic tissue and show that the gene plays a role in not only coronary artery disease, but also calcific aortic valve disease.

Paper Submission Last Date
31 - October - 2026

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